PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT07076 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 180aa MW: 21012.6 Da PI: 8.1776 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 66.2 | 9.4e-21 | 9 | 146 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.........kvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 +rF+Ptd+e + +yL + +++++++ + + +++d+y ePw++ + +a+++++ yf +k +kk+++ nr + ++g Wk++ k k+v OIT07076 9 IRFRPTDSERL-KYLLRFIAKQEMNDSGIiTTNIDVYGGeEPWEIYNhgvpcgnddD-NADSSNYrYFITKLKKKSKS--GYNReVGNKGSWKQQDKAKSV 105 49********9.9999999999988878835566**98659****744677665431.22223332666655555443..445547889************ PP NAM 93 lsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ +g+kk+L + +++ + + +Wvm+ey+l OIT07076 106 RYEntgnsSSVIIGCKKSLCYVNKEYYNQNDGHWVMKEYEL 146 998666545555************999*9**********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MEHLQEGFIR FRPTDSERLK YLLRFIAKQE MNDSGIITTN IDVYGGEEPW EIYNHGVPCG 60 NDDDNADSSN YRYFITKLKK KSKSGYNREV GNKGSWKQQD KAKSVRYENT GNSSSVIIGC 120 KKSLCYVNKE YYNQNDGHWV MKEYELSSVI LQKFDEDRRD YVLCAIKKMP HSADYARCLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G04410.1 | 2e-11 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT07076 |