PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06938
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 301aa    MW: 34961.2 Da    PI: 6.7847
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06938genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.55.4e-5371351128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
               +ppGfrFhPt+eelv +yLk+k+++ k++l +vi+++d+y++ePwd++      ++e++ewyfFs++d+ky++g+r+nrat++g+Wkatg+dk+vls +++
  OIT06938   7 VPPGFRFHPTEEELVGYYLKRKINSLKIDL-DVITDIDLYRMEPWDIQDrckLGYEEQNEWYFFSHKDRKYPSGTRTNRATAAGFWKATGRDKAVLS-REK 105
               69****************************.9***************952432234677**************************************.999 PP

       NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                +g++ktLvfy+grap+g+k+dW+mheyrl
  OIT06938 106 IIGMRKTLVFYTGRAPNGRKSDWIMHEYRL 135
               9***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGYYLKRKIN SLKIDLDVIT DIDLYRMEPW DIQDRCKLGY  60
EEQNEWYFFS HKDRKYPSGT RTNRATAAGF WKATGRDKAV LSREKIIGMR KTLVFYTGRA  120
PNGRKSDWIM HEYRLQTSQH GPPQEEGWVV CRAFKKPTPN NNPSLESWKN TSAYNCIRGT  180
NTSYRPPSKM PSPMHYNPFN QTSNLNNQFL SNPSLYHHHQ DLISSQIIGF ENQLVELPQL  240
DSPTISTSMA THEEDKNSYG SNCQFFDMIE APSSSYSFPN LPLVDDDQNR MSQLLQCYPD  300
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-113NAC family protein