PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06936
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 292aa    MW: 32587.2 Da    PI: 9.3065
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06936genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.41.5e-3874133261
    zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
               +e++lkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+n+k+
  OIT06936  74 PETILKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKR 133
               67899***************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MAFSSIPIYL DPPNWQHEQG NHQQQLGVAN ENPSQLSPAM PPPPAVGGGG GGSAGSVRPG  60
LMVERARLAK ATQPETILKC PRCESTNTKF CYFNNYSLSQ PRHFCKTCRR YWTRGGALRN  120
VPVGGGCRRN NKRGTKRSRS KSPTRSEKRH CPIITSANAT TSNNSIPHLP HPTHLSFLTT  180
PNLHNFSDFT STENGLNFGG SQPQDGTTDQ MEVQARFIDQ FRFQQMQQFP FFSNLEQQPS  240
NNLYQFEAAP EYNVGEVANV KVEENEGTNS QGLNLPRNNF GVTNNQFWTN FH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.15e-43Dof family protein