PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06916
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 295aa    MW: 33732.8 Da    PI: 5.9955
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06916genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.92.1e-49101381129
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
               lppGfrF P+deel+++yL kk++++++    ++ evd++ +ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat sgyWkatgkd++vl+  +g l+
  OIT06916  10 LPPGFRFFPSDEELICDYLYKKIANQEVIK-GTLVEVDLHICEPWQLPEVAKLNSSEWYFFSFRDRKYATGFRTNRATISGYWKATGKDRTVLDPrTGGLI 109
               79************************9555.78***************87788899*************************************9878889* PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrle 129
               g++ktLvfyk+rap+g kt+W+mhe+rle
  OIT06916 110 GMRKTLVFYKNRAPNGIKTSWIMHEFRLE 138
               **************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGLRDIGASL PPGFRFFPSD EELICDYLYK KIANQEVIKG TLVEVDLHIC EPWQLPEVAK  60
LNSSEWYFFS FRDRKYATGF RTNRATISGY WKATGKDRTV LDPRTGGLIG MRKTLVFYKN  120
RAPNGIKTSW IMHEFRLENP HIPPKEDWVL CRVFHKGTKD DQNNTSNNLS PENMYEASVT  180
SPEFVVSPLN NMNNHVSTMP KLLHYGGDDG YHTSTANFSS NSVHQNQNSS NLQLSQEINK  240
VLANEMVHSK CGKEDEFGFL YDMNFEEYSS LQDGGVHNSC IGDMRFEDEN SLVFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-92NAC family protein