PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06859
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Nin-like
Protein Properties Length: 369aa    MW: 41877 Da    PI: 4.7189
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06859genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK69.25.8e-22278327352
    RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                +++l+d + y +lpi+ AAk+L++c+Tv+K+ CR+ G+ RWP+Rkiks+
  OIT06859 278 GKLRLKDFAGYLHLPIEIAAKKLNICPTVMKKVCRRDGLLRWPYRKIKSI 327
               68999*******************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MDYPTSIVPY HDPFDDSHSI DQISLFDENP TIGLPKSSWN QERFTFDPTI LKSNNDFDGD  60
FGVYDPFDDP ILLDIPYECN NYLVENSTNT ESGVFGTNYC SISQDGVFEN KSHVSVWPVL  120
SSSSMCTNNC QILREITHSN GLQISKLDIY GTLGRISHAV LEKYTTDFSS QSHESSQIID  180
FSKDSTSSVK QFLVQYFEAC KLEGYILLQD PLCDFYEALG VGSDDGDSLD IDSLLQLSPT  240
TSRDCQMNQQ EMKNEGEVNC NDMRHEKIPL SAQRERTGKL RLKDFAGYLH LPIEIAAKKL  300
NICPTVMKKV CRRDGLLRWP YRKIKSIRRK ISKREKSLSS NDVEERASAK ADIAKLEEEL  360
AKIFEAFVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17150.13e-07Nin-like family protein