PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT06730 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 196aa MW: 22411.8 Da PI: 4.7075 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 117.1 | 1.7e-36 | 8 | 127 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 lppGfrF Ptdeelvv++L++k++ +++ +vi+++d+y ++PwdL+ k+ ae ++wyf+s+r + +r+t +gyWk+ g d++++s+ + +v OIT06730 8 LPPGFRFYPTDEELVVHFLHRKAALLPCHP-DVIPDLDLYPYDPWDLDGKAMAEGNKWYFYSRRTQ--------SRITGNGYWKSLGLDEPIFSSsSCDKV 99 79*************************999.99**************977778899******9854........799****************9855677* PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk +fy g+ p+g+kt+Wvm+e++l OIT06730 100 GIKKYYAFYIGEPPEGVKTNWVMQEFSL 127 **************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MGDNNVNLPP GFRFYPTDEE LVVHFLHRKA ALLPCHPDVI PDLDLYPYDP WDLDGKAMAE 60 GNKWYFYSRR TQSRITGNGY WKSLGLDEPI FSSSSCDKVG IKKYYAFYIG EPPEGVKTNW 120 VMQEFSLSDS SSSSSSGTSR SSSRRRSRSK IDYSKWVICR VHERNCDNDD DDGTELSCLD 180 EVFLSLDDLD EISLPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 1e-78 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT06730 |