PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT06705 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NF-YB | ||||||||
Protein Properties | Length: 165aa MW: 17935 Da PI: 5.0648 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 179.6 | 2.8e-56 | 26 | 123 | 1 | 98 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegekk 98 vre+dr+lPian++rimkk+lPanaki+k+ak+tvqecvsefisf+tseasdkcq+ekrktingddl+wal+tlGfedy+eplk+yl +yre+eg++k OIT06705 26 VREHDRYLPIANIGRIMKKALPANAKIAKEAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLVWALTTLGFEDYIEPLKAYLIRYREMEGDTK 123 589********************************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MAEAPASPGG GGSHESGGER SPQSNVREHD RYLPIANIGR IMKKALPANA KIAKEAKDTV 60 QECVSEFISF ITSEASDKCQ KEKRKTINGD DLVWALTTLG FEDYIEPLKA YLIRYREMEG 120 DTKGSARGGD GPARIDIVGG QLDSSTQFVY EGSFTHGLDY GNSQM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53340.1 | 8e-72 | NF-YB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT06705 |