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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT06473 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 197aa MW: 22498.1 Da PI: 5.4425 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.4 | 3.3e-05 | 45 | 82 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + Er+RR+++N+++ Lr+l+ k +i + A+ YI++Lq OIT06473 45 IPERKRRQKLNERLLALRSLMTKE-----------AIITDAITYIRELQ 82 67*******************996...........69999999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MLIKFEKMEF LNTPFDDSHI SEDSKVDRMK QIEGEVKEHK SKNLIPERKR RQKLNERLLA 60 LRSLMTKEAI ITDAITYIRE LQTNVSNLTE QLLEMKAPHI EELETKNEEI IDAAEPEVEV 120 VQIGTSNLWI KIVCQKKRGG FTKLMEAMNV LGFDLNDTSV TASKGTLLVT SSVEVVRGGL 180 IEAHQIREIL LEIIRGI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 47 | 52 | ERKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21330.1 | 4e-34 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT06473 |