PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06363
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 370aa    MW: 41912.9 Da    PI: 7.3991
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06363genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.5e-052723101255
               HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               R +++ ++++ L +l+ +      +K + a++L++A+ YI+ Lq
  OIT06363 272 RKEKLGDRISALHRLVAPF-----GKTDTASVLTEAIGYIQFLQ 310
               6778889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MDSRNLYHHY QLQQQQFAGY SLLTGVPALH DWNPSMTSEE EYYYKGDMKR IENKISSEEQ  60
WKSSSTDTFP LMNSSIFQDE HQSSNEQLDY KNSKAYISND YFLKMKDMNG LSNSLFKESY  120
FKQEQQHVFD LNKNLLSEDH SYMNNAKTCI GFSGLAAAAT PNYISNHMEH YDFQGLKKLA  180
FNGLNFKNSS IGDHSTSFGH FCTERMSSGL AGLQELTHDP SNSSNKNPVV SNNIGVSTKA  240
KRLNCSAENP AQEVSKKPRI TSQSSTPMLK VRKEKLGDRI SALHRLVAPF GKTDTASVLT  300
EAIGYIQFLQ DQIMTLSMPY AKSSQEKLHQ IKDWQDSSIN MKGQTVLDLK SRGLCLVPMS  360
FSSYITYSCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-36bHLH family protein