PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT06358

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 752aa MW: 83411.9 Da PI: 7.0571

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT06358	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.8	1e-09	529	566	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+++qV++WF N R + OIT06358 529 FEHflHPYPSDADKHLLARQTGLSKSQVSNWFINARVR 566 664459******************************88 PP
2	BELL	121	5.1e-39	389	460	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+ +eVdkrY++y+eq+q+v++sF+ v+g g+a+pYt+lA+ka+SrhF+cLkdaia q+ OIT06358 389 DRIEHQRRKVKLLSMFDEVDKRYNHYCEQMQMVVNSFDLVMGFGAAAPYTALAQKAMSRHFKCLKDAIAAQM 460 589******************************************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MVTHFNKFKA SHIPIQFREK SNSLDNSMSQ DYHHQGLCSF SSVVERPQDE QQQQHIAHQI 60 RQEKLRVDGF NPPPPLVAIE EEQSSGLQVY GTAGMLSEMF NFPPGLTTAT ATELLQSQLT 120 QCYRHPNQRP QQQQPPTTNL GSEWFSNRQG MVVGGSLQVP SESIDNSKVL NGRDSITAHY 180 ERHHNQISSI NAVESASAMN LFTMNPHPRS PSPSSAHPTT TLQGVPNAIG GHFGQFICGG 240 ASNTGNHFNT PNDIGGLNVI EGQGLSLSLS SSLQHLEAAK VEDQLRMSGG EMLFFNQGAS 300 HNHHHQIHVG FGSSLGLVNV LRNSKYAKPT QELLEEFCSV GRSQLYKKNK VSRNNNTTTS 360 SNPNSNNPSG SKNNNNNSSK DLSPLSAADR IEHQRRKVKL LSMFDEVDKR YNHYCEQMQM 420 VVNSFDLVMG FGAAAPYTAL AQKAMSRHFK CLKDAIAAQM KHSCELLGEK DATTSGLTKG 480 ETPRLKLLEK SLRQQQRAFH QMGMMDAEAW RPQRGLPERS VTILRAWLFE HFLHPYPSDA 540 DKHLLARQTG LSKSQVSNWF INARVRLWKP MVEDMYQKEA KEEEEEDDEN MEKSQNQNSS 600 NNIEQTPTPN SSTNTITTGS ETETKTAATV TAATILTVAS DKRSEIKAPE NDPSIVAMNR 660 LCFSENHTEH HESSSRVTHE MAHHSFPAIQ HSDGMSRREA VPGVEYGTTN IMAISGNGTR 720 MIRFGTTAAG DVSLTLGLHH AGDLPENTHF FG

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MVTHFNKFKA SHIPIQFREK SNSLDNSMSQ DYHHQGLCSF SSVVERPQDE QQQQHIAHQI  60
RQEKLRVDGF NPPPPLVAIE EEQSSGLQVY GTAGMLSEMF NFPPGLTTAT ATELLQSQLT  120
QCYRHPNQRP QQQQPPTTNL GSEWFSNRQG MVVGGSLQVP SESIDNSKVL NGRDSITAHY  180
ERHHNQISSI NAVESASAMN LFTMNPHPRS PSPSSAHPTT TLQGVPNAIG GHFGQFICGG  240
ASNTGNHFNT PNDIGGLNVI EGQGLSLSLS SSLQHLEAAK VEDQLRMSGG EMLFFNQGAS  300
HNHHHQIHVG FGSSLGLVNV LRNSKYAKPT QELLEEFCSV GRSQLYKKNK VSRNNNTTTS  360
SNPNSNNPSG SKNNNNNSSK DLSPLSAADR IEHQRRKVKL LSMFDEVDKR YNHYCEQMQM  420
VVNSFDLVMG FGAAAPYTAL AQKAMSRHFK CLKDAIAAQM KHSCELLGEK DATTSGLTKG  480
ETPRLKLLEK SLRQQQRAFH QMGMMDAEAW RPQRGLPERS VTILRAWLFE HFLHPYPSDA  540
DKHLLARQTG LSKSQVSNWF INARVRLWKP MVEDMYQKEA KEEEEEDDEN MEKSQNQNSS  600
NNIEQTPTPN SSTNTITTGS ETETKTAATV TAATILTVAS DKRSEIKAPE NDPSIVAMNR  660
LCFSENHTEH HESSSRVTHE MAHHSFPAIQ HSDGMSRREA VPGVEYGTTN IMAISGNGTR  720
MIRFGTTAAG DVSLTLGLHH AGDLPENTHF FG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-124	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT06358