PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06126
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 308aa    MW: 35027.3 Da    PI: 8.6495
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06126genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.58e-51311563128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvgl 102
               pGfrFhPtdeelv +yL++kve++++++ + ik++diyk++PwdLp++ +++e+ewy+++kr +ky+++ r+nr ++ sg+Wkatg dk+++s kge +gl
  OIT06126  31 PGFRFHPTDEELVGFYLRRKVEKRPINALQLIKQIDIYKYDPWDLPQASNTGENEWYYYCKRGRKYKNSVRPNRvTAGSGFWKATGIDKPIYS-KGEIIGL 130
               9***************************9*****************9889999*********************5556***************.999**** PP

       NAM 103 kktLvfykgrapkgektdWvmheyrl 128
               kk+Lv+y+g+a kg+kt+W+mhe+rl
  OIT06126 131 KKSLVYYRGSAGKGTKTEWMMHEFRL 156
               ************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEVEKIHCSI VTNNNDNKLE AEEDDDDVPL PGFRFHPTDE ELVGFYLRRK VEKRPINALQ  60
LIKQIDIYKY DPWDLPQASN TGENEWYYYC KRGRKYKNSV RPNRVTAGSG FWKATGIDKP  120
IYSKGEIIGL KKSLVYYRGS AGKGTKTEWM MHEFRLPNNK HLHAANTIAQ EAEAWTLCRI  180
LKRNASYRKF IPDWKEVAAA ASKQRNAVPK ICSNNIDSSK NSQFYISFST PHVIKQNTCS  240
DHAENKQLLN VGQRSSGSTN DGSMLSTVAA AASNSSLLNS PLGFNEWLEN GNWDELKSIF  300
DLSFDPFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.15e-84NAC family protein