PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT06026 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | TCP | ||||||||
Protein Properties | Length: 360aa MW: 40566.6 Da PI: 4.8108 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 102.6 | 6.9e-32 | 87 | 151 | 1 | 65 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 aag+kdrhsk++T++g+RdRRvRls ++a++f+d+qd+LG+d++s++i+WL+++ak+ai+ l + OIT06026 87 AAGRKDRHSKVSTAKGPRDRRVRLSPNTAIQFYDVQDRLGYDRPSEAIDWLIKEAKAAIDSLGKF 151 689*********************************************************99766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence |
MNHQLQISDE EDGSSEEEED EEEVFEENGI ENFHSHCQNQ NLQQLPMPLC PKPAKWAEEL 60 NIVTKGMKPK RAKQDLIEVH RGRIIRAAGR KDRHSKVSTA KGPRDRRVRL SPNTAIQFYD 120 VQDRLGYDRP SEAIDWLIKE AKAAIDSLGK FPKLNAKIQY SFDQLLDEGC IEQSPRFGQQ 180 NYGIPNSEYG VQNHQQEVNY DIPIQNVSLF SSADGAIFSE FQSYPHGHFL NFQSFQEDTI 240 LSSGDHQDSF LTSSIPIYSN SNLEMSRYKR SLNGNVASSN SGNGEDYSSF SLLAHHFPSV 300 LSENQVISHR EPLQSSFFPL ISGDPLSTQL QTLSYDGFSG QISSAPRIQG EEEQGTFSAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 8e-36 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT06026 |