PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT05948 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 272aa MW: 31361.2 Da PI: 6.5779 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.8 | 7e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +lv+ + G +W+tI++ g+ R++k+c++rw +yl OIT05948 14 RGPWTIEEDHKLVHFILNNGIQCWRTIPKLAGLQRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.8 | 9.2e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++ E++++++++++lG++ W++Ia++++ gRt++++k++w++ OIT05948 67 RGALSEAEEDQIIQLHARLGNR-WSKIASHFP-GRTDNEIKNHWNT 110 78889*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MGRQPCCDRV GLKRGPWTIE EDHKLVHFIL NNGIQCWRTI PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAL SEAEEDQIIQ LHARLGNRWS KIASHFPGRT DNEIKNHWNT RIKKKLKQAG 120 IDPLTHKPID HEKYQQESDD TIMELNLPIH HHKTETLSRT ETYDKSNEAE NCAANATDFS 180 LSNNAYHNVL SENFDVDLWS KSCKTMSNCY SPTLSLEAEE SIKFSTVSAV TESSSNIEPA 240 EEQDSLQQWM DSIFSCAVNQ LEEDLFLLRK YN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 6e-81 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT05948 |