PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05863
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 358aa    MW: 38763 Da    PI: 7.996
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05863genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer111.35.2e-3565122359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v+YkeClkNhAaslGghavDGCgEfmps++++  ++++lkCaACgCHRnFHRre+ee
     OIT05863  65 VVTYKECLKNHAASLGGHAVDGCGEFMPSPTANpVDPTSLKCAACGCHRNFHRREPEE 122
                  589******************************9*********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MDISSNTTTA IAATVKSTEA EPETPIRIQP AKPISFSNGV LKRHNSLHLP HHHGFNNNHH  60
HHAVVVTYKE CLKNHAASLG GHAVDGCGEF MPSPTANPVD PTSLKCAACG CHRNFHRREP  120
EEPVLPNQNP IPALEYQPHH RHHPPPPPPP HHGGSGGHSS PNSPSPPPIS SAYYPASAPH  180
MLLALSAGLS GPPAENNPLI SPSSNPMSSV HLTNPNGSGR KRFRTKFTQD QKERMLEFAE  240
KVEWKIQKRD EELINDFCSK IGVEKGVLKV WMHNNKCKKD QATAAAAVNA VASTNNLNGN  300
NANGFGFISR NNTDTIASEL HLHHQSSNDN DKDHTHQLHN NDSVSVHGVT TNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.18e-67ZF-HD family protein