PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT05643 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ZF-HD | ||||||||
Protein Properties | Length: 213aa MW: 24129.2 Da PI: 9.1308 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 102.3 | 3.2e-32 | 46 | 103 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 +v+YkeClkNhAas+Gg++vDGCgEf+ps++++ +++++lkC CgCHRnFHRre+++ OIT05643 46 AVTYKECLKNHAASIGGYTVDGCGEFIPSPDATvADPTSLKCDVCGCHRNFHRREPDD 103 799******************************9*********************876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MDSTCSIPTP TPIPTKTQVP LKPLSFTNVT SKKHHQVHNH QPPSAAVTYK ECLKNHAASI 60 GGYTVDGCGE FIPSPDATVA DPTSLKCDVC GCHRNFHRRE PDDDFMDFRH HHAQVATPAT 120 PTALKPENPR RRRRFRTKFS QEQKDKMYSF SETLGWKLQK CDEATVEEFC NEIGVDKGVF 180 RVWMHNNKST WGKKVFQNAN STRPYPTTTT SKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15210.1 | 4e-53 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT05643 |