PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT05030

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 622aa MW: 69988.8 Da PI: 5.5276

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT05030	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	411	448	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV +WF N R + OIT05030 411 FEHflHPYPKDSEKIMLARQTGLTRSQVANWFINARVR 448 554459******************************88 PP
2	BELL	120.5	7.3e-39	277	348	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r++l++k +kL s+l+eVd++Yk y++q+q+v+ssFe+vaglg+akpYtslAlk+iSr+FrcL+dai++qi OIT05030 277 DRHDLESKMTKLFSMLDEVDRKYKEYYQQMQAVVSSFEMVAGLGAAKPYTSLALKTISRQFRCLRDAIKKQI 348 6899*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MSAYYSNLSN QREVLPMSFL PDQKFDSYHS AGLSDSSIHL NQHSSTVSYS ELPAQNYGEV 60 QTIRGKDEML FIPPTSESGG MQPIGRSVNA SPNFLDNSVM MDPRSFPTKQ FFVPNVEQSL 120 QNQGLSLSLG TQVPPSLHVY SYQDDYTNSS LSSLVGTHVL HSEQGSENKE SKVAEYLSFD 180 LSRGTRAANN PQNSMSLRDM NSGARSIYNS KYLKAAQDLL DEVVNVQEAL KQSDRLRNFN 240 LLGQNRFEEA DLKSSCSASG ISGDHNNSTK GELSPADRHD LESKMTKLFS MLDEVDRKYK 300 EYYQQMQAVV SSFEMVAGLG AAKPYTSLAL KTISRQFRCL RDAIKKQIQV TRRSLGEQGD 360 SQGERLYRLR YVDQQLRQQR SLQQFGMMRQ PWRPQRGLPE TAVSVLRAWL FEHFLHPYPK 420 DSEKIMLARQ TGLTRSQVAN WFINARVRLW KPMIEDMYKE EFGEAEAGSG ASPDRAPEES 480 KEKSIAENTG EEIPESFTTP AVNCSHLDPS DESSNVVTNV QNNSFITKFS FQDGAYEHEK 540 IDAVNTYHAS MLGDIMGNQV SLALRLQNSQ IDQQPISGRT QLAEDDKTGS TLDISKGEYY 600 YIDPVNQQER FSGPHLLSDF VA

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MSAYYSNLSN QREVLPMSFL PDQKFDSYHS AGLSDSSIHL NQHSSTVSYS ELPAQNYGEV  60
QTIRGKDEML FIPPTSESGG MQPIGRSVNA SPNFLDNSVM MDPRSFPTKQ FFVPNVEQSL  120
QNQGLSLSLG TQVPPSLHVY SYQDDYTNSS LSSLVGTHVL HSEQGSENKE SKVAEYLSFD  180
LSRGTRAANN PQNSMSLRDM NSGARSIYNS KYLKAAQDLL DEVVNVQEAL KQSDRLRNFN  240
LLGQNRFEEA DLKSSCSASG ISGDHNNSTK GELSPADRHD LESKMTKLFS MLDEVDRKYK  300
EYYQQMQAVV SSFEMVAGLG AAKPYTSLAL KTISRQFRCL RDAIKKQIQV TRRSLGEQGD  360
SQGERLYRLR YVDQQLRQQR SLQQFGMMRQ PWRPQRGLPE TAVSVLRAWL FEHFLHPYPK  420
DSEKIMLARQ TGLTRSQVAN WFINARVRLW KPMIEDMYKE EFGEAEAGSG ASPDRAPEES  480
KEKSIAENTG EEIPESFTTP AVNCSHLDPS DESSNVVTNV QNNSFITKFS FQDGAYEHEK  540
IDAVNTYHAS MLGDIMGNQV SLALRLQNSQ IDQQPISGRT QLAEDDKTGS TLDISKGEYY  600
YIDPVNQQER FSGPHLLSDF VA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	3e-99	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT05030