PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT05023 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ZF-HD | ||||||||
Protein Properties | Length: 87aa MW: 9481.61 Da PI: 8.3871 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 105 | 4.7e-33 | 24 | 79 | 2 | 58 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +++rY eC++NhAa++Gg+avDGC+Efm+s ge+gt+aal+CaACgCHRnFHRrev+ OIT05023 24 RNIRYVECQRNHAANIGGYAVDGCREFMAS-GEDGTTAALTCAACGCHRNFHRREVD 79 579**************************9.999********************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
MMKKRQVVVR TDGSRRNIGG SSTRNIRYVE CQRNHAANIG GYAVDGCREF MASGEDGTTA 60 ALTCAACGCH RNFHRREVDG GEVVSEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18835.1 | 7e-25 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT05023 |