PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT04659

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 534aa MW: 58669.4 Da PI: 5.4775

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT04659	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.4e-11	346	388	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L OIT04659 346 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 388 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MLSHSMGWMD GKEDEETGTW VHQNNNENNH NNNNNRDEME MGALSTFKSM LDAEDVDWYN 60 MATNNNNHNN NNNSVGAMQF GSNFTEAENN LLLQPVDSSS SCSPSSAFNN LDPSQVHFFL 120 PQKSTIPPLL SALNNPLENG FDLGCGEKGF LETHQNLSVL NKNGMFTSGF QDLSSQNQMG 180 HNNLSSFTQF PCTNLLQMPQ TNSGFGPLVG FGENSANDHS LFLNRSKLLK PLDNFASIGA 240 QPTLFQKRAA LRKNLANNSS GNLGNEIGQT SSNKEVNEMN RKCSSNLDEL EDVSLDGSTL 300 NYDSDDLIEK VEDSVKNGGN SSNATSTVTG VDQKGKKKGL PAKNLMAERR RRKKLNDRLY 360 MLRSVVPKIS KMDRASILGD AIEYLKELLQ KINDLHNELE STPPGSSLTP ATSFYPLTPT 420 ATALPGRIKE ELCPSSFASP LSSPTGQPPR VEVRAREGRA VNIHMFCSRR PGLLLSTMRA 480 LDNLGLDIQQ AVISCFNGFA LDIFRAEQSK EGQDIHPEQI KSVLLDSAGF HGMI

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MLSHSMGWMD GKEDEETGTW VHQNNNENNH NNNNNRDEME MGALSTFKSM LDAEDVDWYN  60
MATNNNNHNN NNNSVGAMQF GSNFTEAENN LLLQPVDSSS SCSPSSAFNN LDPSQVHFFL  120
PQKSTIPPLL SALNNPLENG FDLGCGEKGF LETHQNLSVL NKNGMFTSGF QDLSSQNQMG  180
HNNLSSFTQF PCTNLLQMPQ TNSGFGPLVG FGENSANDHS LFLNRSKLLK PLDNFASIGA  240
QPTLFQKRAA LRKNLANNSS GNLGNEIGQT SSNKEVNEMN RKCSSNLDEL EDVSLDGSTL  300
NYDSDDLIEK VEDSVKNGGN SSNATSTVTG VDQKGKKKGL PAKNLMAERR RRKKLNDRLY  360
MLRSVVPKIS KMDRASILGD AIEYLKELLQ KINDLHNELE STPPGSSLTP ATSFYPLTPT  420
ATALPGRIKE ELCPSSFASP LSSPTGQPPR VEVRAREGRA VNIHMFCSRR PGLLLSTMRA  480
LDNLGLDIQQ AVISCFNGFA LDIFRAEQSK EGQDIHPEQI KSVLLDSAGF HGMI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	336	354	KKKGLPAKNLMAERRRRKK
2	348	355	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-120	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIT04659