PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT04622

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 410aa MW: 45548.9 Da PI: 7.16

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT04622	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.1	2e-28	145	199	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm+v+gLt+++++SHLQkYR + OIT04622 145 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGVEGLTRHNIASHLQKYRAH 199 5689***************.******************************86 PP
2	Myb_DNA-binding	45.8	1.4e-14	148	197	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +g+t+ ++ s++qky+ OIT04622 148 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGvEGLTRHNIASHLQKYR 197 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MLTVSPLSYK TTKNDKDNHM ESFTIRGVDD FLQFGDGNLL ESIDFDDIFL GSNVDDDVLP 60 DLEMDSEILA EFSVSSCDES DHMNSYNTTT PPLHVEEHNS FRKDEVEKIP SDLNQKSEKS 120 KPKSKENDKC KKSSRQSKNP EGKRKVKVDW TPELHRRFVQ AVEQLGVDKA VPSRILELMG 180 VEGLTRHNIA SHLQKYRAHR KHLLAREAEA ASWSQRKQMY GGAALIRGAG KRDINPWPPT 240 PTMGFPPMAA ASMPPHFRPL HVWGHPPTDQ SMMHMWPKHI TPLPPAWAPV VSPHSSPPTD 300 PSFWHSHNQR VLTSLAPGTP CFPSPIAPTT FPVSCIPPPA MIKVVPTGAR QDLPKPPSDF 360 HPSTESIDAA IGDVLAKPCL PPLPLGLKPP SIDSVLNELQ RQGINKIPPT

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MLTVSPLSYK TTKNDKDNHM ESFTIRGVDD FLQFGDGNLL ESIDFDDIFL GSNVDDDVLP  60
DLEMDSEILA EFSVSSCDES DHMNSYNTTT PPLHVEEHNS FRKDEVEKIP SDLNQKSEKS  120
KPKSKENDKC KKSSRQSKNP EGKRKVKVDW TPELHRRFVQ AVEQLGVDKA VPSRILELMG  180
VEGLTRHNIA SHLQKYRAHR KHLLAREAEA ASWSQRKQMY GGAALIRGAG KRDINPWPPT  240
PTMGFPPMAA ASMPPHFRPL HVWGHPPTDQ SMMHMWPKHI TPLPPAWAPV VSPHSSPPTD  300
PSFWHSHNQR VLTSLAPGTP CFPSPIAPTT FPVSCIPPPA MIKVVPTGAR QDLPKPPSDF  360
HPSTESIDAA IGDVLAKPCL PPLPLGLKPP SIDSVLNELQ RQGINKIPPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44190.1	2e-73	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT04622