PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT04598

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HB-other

Protein Properties

Length: 340aa MW: 39070.2 Da PI: 5.7669

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT04598	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.8	3.8e-08	278	311	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +qV +WF N+R + OIT04598 278 KWPYPTEEDKAKLVQETGLQLKQVNNWFINQRKR 311 569*****************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MAFQDHFSQE LALQQHQQQN TDDVSDHSMS FSMKLSQQYR GERVDEVSNN NNNNNNNDSW 60 ESEKYKADIL NHHLCDQLLS AHVACLRIAT PVDQLPRIDE QLTESQNSVA KYYVVGQSQR 120 PIDDKDLDQF MTHYVLLLSS FKEQLQQHVR VHAMEAVMAC WELDQSLQNL TGVGPGESTG 180 ATMSDDDDDQ LAESETNTNC YNGVLDGSDS TGFGPLVPTE SERFLMERVR QELKQEFKQG 240 YKEKIVDIRE EILRKRRAGK LPGDTTSALK AWWKSHSKWP YPTEEDKAKL VQETGLQLKQ 300 VNNWFINQRK RNWHTTPSSS STQKSKRKSA GEKSRTDHFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-145	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT04598