PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT04499 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 213aa MW: 24427.1 Da PI: 10.0753 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.5 | 0.00045 | 89 | 111 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F++ L H +H OIT04499 89 YKCETCSKFFRSYQALGGHVASH 111 9***********99999888877 PP | |||||||
2 | zf-C2H2 | 14.3 | 0.00012 | 135 | 157 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+++Fs+ L H r+H OIT04499 135 HECPVCSRVFSSGQALGGHKRSH 157 79******************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MWRIKKSRIS YTHYMSNYDY RHVAYAESCA YASARVPSSE PVSSIWDTSP EEDVAYCLMM 60 LSRDKWRKKE KEKDQKQDKV TKTRTRGKYK CETCSKFFRS YQALGGHVAS HKKIKVSTNK 120 TSETVETKYK EVKIHECPVC SRVFSSGQAL GGHKRSHGIT STKIKLSRID RTMIDLNVPA 180 SLEDAEIITQ IEFSSVSDAK FVNPIKPLKV KLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 3e-45 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT04499 |