PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04326
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 346aa    MW: 37680.8 Da    PI: 5.2544
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04326genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-09190237455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +h+ +Er RR++iN ++  L+el+P +    +k    a++L + +++++sLq
  OIT04326 190 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQSLQ 237
               8*************************9....89999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MESTQVRSAS CGGKAGETAT GFHQISGEGQ SIIMPVPMEA AGNSFTALLE LPPNQALDLL  60
VHSDEMGSAK LSLPDTHNRP YYSSPLIDRA SAGEFAGEFS VFAAGNSPEN GSFPSDSQFV  120
KQEPVDSDSN PNSSPEFSNP TFDQKTTKRK ECQKKGKESS SKKSKKSAND TSEKLPYVHV  180
RAARGQATDS HSLAERARRE KINARMKLLQ ELVPGCNKIS GTAMVLDEII NHVQSLQRQV  240
EFLSMRLAAV NPRVDFNLDS LFVAESGSTV DSSFAGIVAP SIWPEGQTSG NRNQYQQLLQ  300
IDGFNQSVWV REEDNSSFIT PENSLLTYDS SANSASLHQN QLKMEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.24e-76bHLH family protein