PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04024
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 294aa    MW: 32539.3 Da    PI: 8.818
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04024genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.37.8e-3380135258
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  +++rY+eClkNhAas+Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+e+ 
     OIT04024  80 SRARYRECLKNHAASIGGNVTDGCGEFMPS-GEEGTLEALKCAACNCHRNFHRKEQP 135
                  5789*************************9.999********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MALAGEDKEM RMQGSLGYHS LDQNLDQSNH HHHQPNNNNN LQPQQDHEKS STGGGTGSAP  60
PVVVPYSSGG STNNKFKITS RARYRECLKN HAASIGGNVT DGCGEFMPSG EEGTLEALKC  120
AACNCHRNFH RKEQPNVDNN NAGIMVVHPL QLPQPLPSPL PSMNHHHQHG RSVWSTMPPQ  180
PVKMAFGGSG GGGSGATDSS SEELNFNTYQ QATSVPPQPQ PPFMLAKKRF RTKFTQDQKE  240
KMLEFAEKLG WRIPREDDTE VQRFCSQVGV KRQVFKVWMH NNKNPSAKKN PQEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.11e-58ZF-HD family protein