PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03551
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 345aa    MW: 38412 Da    PI: 6.9481
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03551genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.62.5e-28141200258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
               +Dgy+WrKYGqKe+ gs+fpr+YYrCt++   +C +kk+v+r ++dp v+e+tY+++H++
  OIT03551 141 EDGYTWRKYGQKEILGSRFPRAYYRCTHQklyNCLAKKQVQRLDNDPYVFEVTYRSQHTC 200
               7****************************999**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MDETTATILY GCKLAKELEA NLPNWANQPQ ITLNKTEEIV AVFNNVKERL SHHHHQQQQQ  60
ALEFFHAAEM LGDQRQATAA FAVHGLPPAQ ESDQMGVSDS TRGGGSSSSS SQRQRRRAGD  120
TDTRTVRVAA PRMGNLELPP EDGYTWRKYG QKEILGSRFP RAYYRCTHQK LYNCLAKKQV  180
QRLDNDPYVF EVTYRSQHTC YMPATAPTVP PPLMEKITHQ TITILPPPHL PLRPPPTPAS  240
LSAHWLTMDI KPQGDQGTST IPFDIQRDFG HSTGGSLASI CNVMSRDGGG AGPSGVRYGR  300
EVDYQLQVVD MADAMFNYSG SCSNNSMDII FSSIDDKWDS AEKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-42WRKY family protein