PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03390
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 396aa    MW: 45206.3 Da    PI: 5.9641
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03390genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.64.9e-23171503128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgel 99 
                G+rF+Ptdeel+ +yL k v+ k++++ ++i+  d+y   +Pw++  +++ +e++++ yfF+k +++++ g r +r  + +g Wk   k+k+v++ +++l
  OIT03390  17 LGIRFRPTDEELI-RYLLKFVSCKSFSC-DHIRVEDLYGNkKPWEIFqNNFLGEDTKVnYFFTKLKRRKQGGLRFSRgLIGEGCWKGLDKSKPVFK-GSKL 114
               59***********.9*************.88**99*996549****6345545555445******************999***************9.9*** PP

       NAM 100 vglkktLvfy......kgrapkg.ektdWvmheyrl 128
               vglkk++ +       +++  +g ++  W m+ey+l
  OIT03390 115 VGLKKSFRYQekdsctEKSGDQGsKNIVWNMKEYSL 150
               **********766655333334414678******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MTISSKTSHN YAPYPVLGIR FRPTDEELIR YLLKFVSCKS FSCDHIRVED LYGNKKPWEI  60
FQNNFLGEDT KVNYFFTKLK RRKQGGLRFS RGLIGEGCWK GLDKSKPVFK GSKLVGLKKS  120
FRYQEKDSCT EKSGDQGSKN IVWNMKEYSL NDNILKVLRE RNIIQHEDYV LCCIKRKFVH  180
ANDHKELGDH MEIASGNTVV AVMDAMLSTT QEHELDYVTS SSGTDFHDSS SSYQGTGFHD  240
LCPSNRFTSF EYNNVFQLQQ DQNIEQLVNV QAQNIEEKAP SAQSHVEYVG RSSEEGTTSN  300
QFTYSPDNND FQLQHDHNNI ECDHRDTVPS TLADVMKNID HVDRKVYEYL GSFLAEKSDT  360
AEPQLPDESG HDHIIMSPMA QGSSTAMVNE ENINAV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
180106KRRKQGGLRFSRGLIGEGCWKGLDKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-18NAC family protein