PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT03390

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 396aa MW: 45206.3 Da PI: 5.9641

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT03390	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	73.6	4.9e-23	17	150	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgel 99 G+rF+Ptdeel+ +yL k v+ k++++ ++i+ d+y +Pw++ +++ +e++++ yfF+k +++++ g r +r + +g Wk k+k+v++ +++l OIT03390 17 LGIRFRPTDEELI-RYLLKFVSCKSFSC-DHIRVEDLYGNkKPWEIFqNNFLGEDTKVnYFFTKLKRRKQGGLRFSRgLIGEGCWKGLDKSKPVFK-GSKL 114 59*********.9*********.8899996549*6345545555445**************999***********9.9* PP NAM 100 vglkktLvfy......kgrapkg.ektdWvmheyrl 128 vglkk++ + +++ +g ++ W m+ey+l OIT03390 115 VGLKKSFRYQekdsctEKSGDQGsKNIVWNMKEYSL 150 ********766655333334414678****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MTISSKTSHN YAPYPVLGIR FRPTDEELIR YLLKFVSCKS FSCDHIRVED LYGNKKPWEI 60 FQNNFLGEDT KVNYFFTKLK RRKQGGLRFS RGLIGEGCWK GLDKSKPVFK GSKLVGLKKS 120 FRYQEKDSCT EKSGDQGSKN IVWNMKEYSL NDNILKVLRE RNIIQHEDYV LCCIKRKFVH 180 ANDHKELGDH MEIASGNTVV AVMDAMLSTT QEHELDYVTS SSGTDFHDSS SSYQGTGFHD 240 LCPSNRFTSF EYNNVFQLQQ DQNIEQLVNV QAQNIEEKAP SAQSHVEYVG RSSEEGTTSN 300 QFTYSPDNND FQLQHDHNNI ECDHRDTVPS TLADVMKNID HVDRKVYEYL GSFLAEKSDT 360 AEPQLPDESG HDHIIMSPMA QGSSTAMVNE ENINAV

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MTISSKTSHN YAPYPVLGIR FRPTDEELIR YLLKFVSCKS FSCDHIRVED LYGNKKPWEI  60
FQNNFLGEDT KVNYFFTKLK RRKQGGLRFS RGLIGEGCWK GLDKSKPVFK GSKLVGLKKS  120
FRYQEKDSCT EKSGDQGSKN IVWNMKEYSL NDNILKVLRE RNIIQHEDYV LCCIKRKFVH  180
ANDHKELGDH MEIASGNTVV AVMDAMLSTT QEHELDYVTS SSGTDFHDSS SSYQGTGFHD  240
LCPSNRFTSF EYNNVFQLQQ DQNIEQLVNV QAQNIEEKAP SAQSHVEYVG RSSEEGTTSN  300
QFTYSPDNND FQLQHDHNNI ECDHRDTVPS TLADVMKNID HVDRKVYEYL GSFLAEKSDT  360
AEPQLPDESG HDHIIMSPMA QGSSTAMVNE ENINAV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	106	KRRKQGGLRFSRGLIGEGCWKGLDKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-18	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT03390