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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03307 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 29099.4 Da PI: 7.2837 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.1 | 1.6e-13 | 84 | 133 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah +Er+RR+++ + + Lr++lP + ++K s ++ Le+A++YI++L+ OIT03307 84 AHRDVERQRRQEMANLYTSLRSHLPLEF--LKGKRSASDHLEQAMNYIQHLE 133 8*************************65..9*******************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MDPLSEIFSF HKIQEYDIYH QEIQIPSTPC QLPQQDLVKI IGTNSLPRND TIKKKRSRRL 60 LSSVSTESTS NETMDQNKLI RIIAHRDVER QRRQEMANLY TSLRSHLPLE FLKGKRSASD 120 HLEQAMNYIQ HLENSINDLE KKRDKLKLLA HYSNREDKES IHKYNLDEYL TVNPCQDGVE 180 ILIIKKFGKE GLPLSKVVEE LVKRKLNVVT CVSTKVDETS LHKIQVEVTD VSCMDVSTLE 240 EKLAEMILNL S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 6e-34 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03307 |