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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03182 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 28970.4 Da PI: 9.5452 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.3 | 8.4e-11 | 81 | 129 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+++ +++Lr l+P+ +K s ++ Le+ v+YIk++ OIT03182 81 VRRDVERQRRRDMARLYQRLRLLIPSkY---LMGKRSISDHLEEIVDYIKDM 129 56789*********************77...9******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MDDYDQFDYA QVEHLLHLLS SSPPPLPPPL TTNSSVPLQT QSCNLVNTPV PKRKAAIANI 60 DQDTGKGKPP KEKENTEKKV VRRDVERQRR RDMARLYQRL RLLIPSKYLM GKRSISDHLE 120 EIVDYIKDMR KNIEELESKR ERLKEMRNIC SSDHNSHLDA PSSSMKIDDN QDRIIVKKCE 180 QGVEISVISN LGGGLALSKV LRVLMEERLL VISCVSSKIN QRSLHIIQSE VNSRGDIDLG 240 RLQFKLMSLS YKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 5e-16 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03182 |