PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03104 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ZF-HD | ||||||||
Protein Properties | Length: 229aa MW: 26076.5 Da PI: 8.2223 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 103.8 | 1.1e-32 | 50 | 105 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 k +YkeClkNhA+ +GghavDGCgEfmp+ ge+g+ +alkCaAC+CHRnFHR+e++ OIT03104 50 KPKYKECLKNHAVGIGGHAVDGCGEFMPA-GEDGSLDALKCAACNCHRNFHRKETQI 105 679*************************9.999*********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MEFETQDDQK EIRASPNYNS VLEISNSTDE PKMPSNSDEL ILDAPLQMRK PKYKECLKNH 60 AVGIGGHAVD GCGEFMPAGE DGSLDALKCA ACNCHRNFHR KETQIHHQPY YRHPPCGYFQ 120 HVMPQQRPLP LPSTSGGGGG GGYREDQEEM CNPNNSGTKK RFRTRFNQEQ KEKMLELAEK 180 LGWRIQRQDE GVVKQLCNEI GIKRHVFKVW MHNNKLTLGK KTLIQSTNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 8e-67 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03104 |