PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02677
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 335aa    MW: 38091.7 Da    PI: 7.0946
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02677genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.23.7e-54121411128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
               +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL++  ++ +  ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++ ++++
  OIT02677  12 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKEicRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNSK 111
               69****************************.9***************954555442556****************************************** PP

       NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                +g++ktLvfy+grap+g+ktdW+mheyrl
  OIT02677 112 RIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 141
               ****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MMSGAGNGQL SVPPGFRFHP TDEELLYYYL RKKVSYEAID LDVIREVDLN KLEPWDLKEI  60
CRIGSGPQNE WYFFSHKDKK YPTGTRTNRA TTAGFWKATG RDKAIYLSNS KRIGMRKTLV  120
FYTGRAPHGQ KTDWIMHEYR LDDNTAEVEP LQEDGWVVCR VFKKKNYTRG FQHELGEDDQ  180
EQQLHFADHM KSGSSDPKQN MHQPHHQACY DYASNFDGSM HLPQLLSPDL LSVTPCPQLP  240
LSTNMNLNEC SHQNLLRLTS AAGAAGCSSS TFNIIPQHDK FSGDWSFLDK LLASNQGALQ  300
SQAAIGDNLV NPTGTQKYPV FHHHGFDPDL FKFSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-106NAC family protein