PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02602
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Trihelix
Protein Properties Length: 356aa    MW: 39867.7 Da    PI: 8.9167
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02602genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix52.99.4e-1723109276
  trihelix   2 WtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
               Wt +e+++Liea++ ++er  +++              + +W++v +++++ g+ rs++qC++kw+nl +++kk++e e++ ++++ 
  OIT02602  23 WTVEETMVLIEAKKMDDERRMKRQgdgtsteirgnkPGELRWKWVEDYCWKMGCLRSQNQCNDKWDNLMRDFKKVREYERRVAENNN 109
               *************977776665433455555665558899****************************************9865544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MDRVVGNQSG GSNMLRDYRK GNWTVEETMV LIEAKKMDDE RRMKRQGDGT STEIRGNKPG  60
ELRWKWVEDY CWKMGCLRSQ NQCNDKWDNL MRDFKKVREY ERRVAENNNN NNNQEIIIKS  120
YWKIERSERK EKNLPTNMLP EIYDALVQVV DRKCTQKLLV GGGGGTYAAA AVAVSLNQST  180
SLTNSLSPTL QQQSFQAQIA ALPLPPPPPT LSPPAVVAQQ SAQPPSLPYT QPLPAMCDSS  240
DPDRSDHSDS PAKRRRKGEG EGTSSGNNNN INNLQEVGSA IFKSAAIIAE TIQASEEREE  300
RRHRELLSLH ERRLQIEESK AEINRQGING LVDSINRLAN SILSLAGNKS QAAPPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.19e-58Trihelix family protein