PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02385
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 297aa    MW: 34239.8 Da    PI: 6.8512
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02385genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.52.2e-5281321128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
               lppGfrFhPtdeelv++yL++k++++++ +  +i+e+d+yk++PwdLp+ +  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ +   + +g
  OIT02385   8 LPPGFRFHPTDEELVMHYLCRKCASQPIAV-PIIAEIDLYKYDPWDLPHLALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGH--PKPMG 105
               79**************************99.88***************7656689*************************************99..789** PP

       NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
               +kk Lvfy g+apkgekt+W+mheyrl
  OIT02385 106 IKKALVFYAGKAPKGEKTNWIMHEYRL 132
               *************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MTAAELQLPP GFRFHPTDEE LVMHYLCRKC ASQPIAVPII AEIDLYKYDP WDLPHLALYG  60
EKEWYFFSPR DRKYPNGSRP NRAAGTGYWK ATGADKPIGH PKPMGIKKAL VFYAGKAPKG  120
EKTNWIMHEY RLADVDRSAR KNNNSLRLDD WVLCRIYNKK GSIEKNQLSN RKMNTSYMDM  180
VESPEDRKPE ILPPPQQQQQ VHNDFFYLDP SDSVPKIHSD SSCSEHVLSP EFTCEREVQS  240
EPKLTDWEKA TLDLPFNYMD ATTGATTVDN SLLGSQFQSS YQMSPLQDMF MHLHKPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-142NAC family protein