PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02263
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 390aa    MW: 44964.2 Da    PI: 8.8328
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02263genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.93.6e-131897999
              HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3  9 dvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                +k++ l +p  f+ ++  g++   +++  +  + +++W+vk+  ++++    +++GW +F+++++L+ gD ++F+++g++ef   v++f++
  OIT02263 18 PGFKQA-LKIPTGFL-KYlkGYD---HIEHAILRSGSKQWRVKV--SGCR----FEAGWADFAQQHDLQLGDLLIFRHEGNMEF--EVTIFDS 97
              455555.99*****9.6656544...45667777899*******..6666....9************************99999..9999986 PP
2B359.46.4e-19156236589
               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
               +++++ l+++ l+lp +fa++  +k ++   l+l+de+ r+W++kl  +++++r+++++GW++F  +n+LkegD ++F+l+ + +
  OIT02263 156 TIRPYCLSRSFLILPQQFANSLTNK-KC--YLILRDERQRTWNLKL-SSNCQKRVYIGGGWRKFIADNRLKEGDRIMFELVTDGG 236
               6789999************888644.35..6***************.5888888*************************987644 PP
3B354.42.3e-17288370489
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                +++++ +k++ l++p +fa+++g+ +++  +++l+de+ rsW+v l   + s ++ + +GW++F  angL++gD++ F+l++++e
  OIT02263 288 STIKPYCTKKSVLYFPLDFAKSNGLMNRK-CEMILKDEEQRSWTVWL--GRDSHHFGIINGWSKFRTANGLQVGDTFKFELIKNEE 370
               56789999***************887655.59***************..999999*9************************98754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MKEKVRPVKP HFFKPIQPGF KQALKIPTGF LKYLKGYDHI EHAILRSGSK QWRVKVSGCR  60
FEAGWADFAQ QHDLQLGDLL IFRHEGNMEF EVTIFDSSGI VREYAEYLQE EKEGEAAHTF  120
GETSEDFEFE EKPSPGIKSS NKVSSHAEAA THFECTIRPY CLSRSFLILP QQFANSLTNK  180
KCYLILRDER QRTWNLKLSS NCQKRVYIGG GWRKFIADNR LKEGDRIMFE LVTDGGTSIW  240
KFQVVSDAET PMEKSQDIRK KPSNMSPLNA KVSTSTSGDD NDLPYFISTI KPYCTKKSVL  300
YFPLDFAKSN GLMNRKCEMI LKDEEQRSWT VWLGRDSHHF GIINGWSKFR TANGLQVGDT  360
FKFELIKNEE IPIAHLHCKY SEKVAKREGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.15e-54B3 family protein