PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02152
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 462aa    MW: 52611.6 Da    PI: 8.0932
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02152genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.87.8e-1327116198
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               ffk+    + ++ +rl++p +fa+++ ++  ++  + le +sg++Wev++    ++g+++l+ GW++F +   +  g f++F ++ rs f  +v++f+
  OIT02152  27 FFKII--LSQHECSRLRIPEDFASRYCKNMLNP--VYLEVPSGEVWEVEV--VHSQGQIYLGIGWQDFSDFYSISCGHFLMFGYNARSHF--NVTIFD 116
               66766..66677789***********5454444..***************..999999**************************999999..999987 PP
2B351.81.5e-16239323493
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                + ps+v++ ++l++p kfa+++ +++++  +l+l+ +    W+vk++   +     +t GWk Fv +n+Lk+ D++v++++++ ++   +
  OIT02152 239 FMHPSYVTRPHNLSIPLKFARKYFMQNRG--KLVLRVPGIGFWTVKCTL--RTANAKITCGWKAFVLDNKLKSSDVCVLEVIKDtKRL--L 323
               5789*******************777555..7***************55..4444669**********************99974444..3 PP
3B350.63.6e-16368457498
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                + ps+v+  + l++++  a+++   +++  +++l+ ++ rsW +++++  k gr  l +GWk+Fv++n++k+gD++vF+ ++r++f ++v +f 
  OIT02152 368 PMQPSYVSGPS-LTISRVIASKFF--PTRYSDVVLQVPNKRSWALNCTVGTKNGR--LNSGWKKFVQDNNIKVGDVCVFEQVSRTKFLFNVYIFP 457
               56677777776.999999998886..345559***************77555555..***********************888899988888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MAAKRQTRSG EGSSIWNSST NITRPKFFKI ILSQHECSRL RIPEDFASRY CKNMLNPVYL  60
EVPSGEVWEV EVVHSQGQIY LGIGWQDFSD FYSISCGHFL MFGYNARSHF NVTIFDLSAS  120
EIEYPTKEIE SDDSIDISDV VEHSVENLSH DHLGQERKRK RQDGQEEDDI PVNVHNKVIE  180
EEKSQGNVVS LEKSEGCREQ EQQSNIVTSK SDAERDEERA ENYLRAKAFK SKNPFIISFM  240
HPSYVTRPHN LSIPLKFARK YFMQNRGKLV LRVPGIGFWT VKCTLRTANA KITCGWKAFV  300
LDNKLKSSDV CVLEVIKDTK RLLIDVTIFP GVSDSTNESI NPEPSVPCSP AYQRAKAFTS  360
ENPFFIYPMQ PSYVSGPSLT ISRVIASKFF PTRYSDVVLQ VPNKRSWALN CTVGTKNGRL  420
NSGWKKFVQD NNIKVGDVCV FEQVSRTKFL FNVYIFPAVE GV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-35B3 family protein