PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT01685 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 235aa MW: 27236.2 Da PI: 10.0846 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.3 | 2e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev +iifsstgklye+s+ OIT01685 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGLIIFSSTGKLYEFSN 59 8***********************************************95 PP | |||||||
2 | K-box | 75.2 | 1.8e-25 | 77 | 170 | 5 | 98 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ ++ +++ + +q+e++ L+++++ Lq+++R+l+Ge+L L +k+L +Le+qLe sl+ iR kK+++l+++i+el +k ++++en +L kk+ OIT01685 77 QQLHNPASELKLWQREAEILRQQLHDLQENHRQLMGEELCGLGVKHLTNLENQLEMSLRGIRMKKEQILKDEIQELTQKGSMIHQENLELYKKV 170 444467888999*******************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGLIIFSS TGKLYEFSNT 60 SMKSVIERYN KTKDERQQLH NPASELKLWQ REAEILRQQL HDLQENHRQL MGEELCGLGV 120 KHLTNLENQL EMSLRGIRMK KEQILKDEIQ ELTQKGSMIH QENLELYKKV NLIRQENAEL 180 YKKVYGTRNA NTVNGNTNSP YRFTVSREVH APIHLQLSQP EPHNFEMPAG VSNSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-107 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT01685 |