PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT01666 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HB-other | ||||||||
Protein Properties | Length: 150aa MW: 17769.1 Da PI: 5.6059 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31.6 | 2.9e-10 | 2 | 35 | 19 | 52 |
HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrR 52 F + ++ + +e+L+++lgL+++qVk+WF N+R OIT01666 2 FSQMPNSENDVIEKLSEELGLDTNQVKIWFDNKR 35 78888888999**********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
VFSQMPNSEN DVIEKLSEEL GLDTNQVKIW FDNKRCYIQA QRDKEECENL RVENSKLLSE 60 NLQMSLELKN RLCATCNPKK QRKLLEDLQN ENAILQAELT IISKMHDNLK ENPERYLLLK 120 HHLHHYDNPS GLDLDLKVEC DHNFPRLNWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 3e-13 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT01666 |