PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT01664 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 168aa MW: 20058.6 Da PI: 4.9865 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 50.8 | 2.9e-16 | 9 | 53 | 8 | 52 |
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 ++eq++ Lee+F + ++p + +e+L+++l+L+++q+k+WF N+R OIT01664 9 SDEQIQKLEEVFSEMPNPENDVIEKLSEELRLDTNQIKIWFENKR 53 689*****************************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 168 aa Download sequence |
MDSPMGSSSD EQIQKLEEVF SEMPNPENDV IEKLSEELRL DTNQIKIWFE NKRCYIQAQR 60 DKEERENLRL ENSRLLSENL QMNLELRNRL CATCNPEKQR KILQDLQNEN AILQAELTII 120 SNMHDHLKEN PERYLLLKHH LHHYDNPSGL DLNLKVECDH NFPRLNWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G03260.1 | 8e-12 | HD-ZIP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT01664 |