PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT01420 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 189aa MW: 21033.8 Da PI: 5.4108 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 22.2 | 3.8e-07 | 165 | 184 | 2 | 21 |
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 C++Cgk F+r nL+ H+r OIT01420 165 FCTICGKGFKRDANLQMHMR 184 6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MSFLEQKIHQ LQELVHIIVD HKSLVGIQGN DLSIQQQQLI TADLTSIIVQ LISTAGSLFP 60 TVKHHTLSST SPTTKQHAQL GVVSVPSGKD INVGALPHSI NVTKVEDQPN QVDLMGDHGI 120 EQKHDVDEHE AKDDDEFHEE ENLPPSSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLQ 180 MHMRVMGMS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.2 | 5e-59 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT01420 |