PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT01246

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 291aa MW: 32194.3 Da PI: 6.8603

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01246	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.6	1.6e-34	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt+eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl OIT01246 44 KPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 98 79****************************************************8 PP
2	Myb_DNA-binding	79.1	5.4e-25	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTte++e++vdav+qlGg+ t+ktI+rtmg kg+tl+++ks++qky+ OIT01246 46 RLRWTTELHERFVDAVTQLGGPdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 97 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MYSTLPIRNL GGSGDYFNNI HNSVSIDGTN LPGDACLVLT TDPKPRLRWT TELHERFVDA 60 VTQLGGPDKA TPKTIMRTMG VKGLTLYHLK SHLQKYRLGK QSSKEATENS KDVSCPAESP 120 DTGSSTSGSS RVIAQDINDG FQVTEALRVQ MEVQRRLHEQ LEVQRRLQLR IEAQGKYLQS 180 ILEKACKAFS SQSIEPNGLE VNREELSELA MKVANDCEGI VNVPSLHENA PSIENKNACH 240 VPARLGDCLL DDCFPSNGNG DLKKRPRAFT IVNGSPIESN TRQVEWMMSN T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-116	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT01246