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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT01028 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 165aa MW: 19096.4 Da PI: 6.5093 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.9 | 5e-10 | 38 | 78 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri ++f L++l+P K++ +++Le+A++Y+k L OIT01028 38 ARERRHRISDRFKILQSLIPGG-----SKMDTVTMLEEAIHYVKFL 78 699*****************95.....5****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MDQQHSTCFS SSSKINDKEK KKKRSVVKLS TDPQSVAARE RRHRISDRFK ILQSLIPGGS 60 KMDTVTMLEE AIHYVKFLKT QIWLHQTMIN IIDDYDNPNY HHPLLMAHDS IFANYYPHEN 120 NPTPVENAQI NYNLDQLQLP GYAVSDGDQF QGEETNISGD AFMYY |
Link Out ? help Back to Top | |
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Ensembl | OIT01028 |