PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00848

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 568aa MW: 64606.4 Da PI: 4.2312

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00848	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	58.1	3e-18	10	155	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekew......yfFskrdkkyatgkrknra..tksgyWkatgk 88 G+rF+Ptd+elv ++L + v++++l+ + +i+ d+yk ePw + e++w yf ++r+k+ + r +r+ + g+Wk++ k OIT00848 10 REGYRFRPTDSELV-KFLLRFVAKQELHDNGFIAMHDVYKQEPWVTYShghstgG---VEDNWdtsiyrYFITPRKKN---KGRFRRTvgKRGGTWKQQDK 103 57**********.99999999999999899********99633443331...22233334433455554443...346666412569**** PP NAM 89 dkevlsk......kgel..vglkktLvfykgrapkge......ktdWvmheyrl 128 ++v+ k + + +g k++ + ++++ k +W+m+ey l OIT00848 104 GRAVTIKscdqrkR--DliIGRMKSMCYTEKNNTKCInsddynDGKWLMKEYVL 155 9987765433..156******76555544222232778****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MNMMKLDDLR EGYRFRPTDS ELVKFLLRFV AKQELHDNGF IAMHDVYKQE PWVTYSHGHS 60 TGGVEDNWDT SIYRYFITPR KKNKGRFRRT VGKRGGTWKQ QDKGRAVTIK SCDQRKRDLI 120 IGRMKSMCYT EKNNTKCINS DDYNDGKWLM KEYVLSDPIL NKFSNSERKD YVMCAIKKLP 180 KRSTSCNFSQ NSNVTTTMES CSEQEKVDTE VTSDMNNYVV DQPLMVQDYF VDQAIVESVE 240 PLMVETVGIN SVKNQEYNEV ITPIYYVEEP MEESKVQSQE ATGVENGSSL LGLSTFSQIQ 300 EFMTADFENA MQEFNVPEIK DRLAENMGCD TLLEKNQTQD QEEEGCTFAV NEEHNITYVE 360 SEAKATSFLE LLTGCRGYAM GNNLVQLVPD QSTTITTTML PQFRAGSWNR LYEPLLSKSL 420 VPESTTMLNS NEIATGECDT TPCSIQPATD VTLDFEGPTT TVEVPEVYLE SELNTILQLE 480 GPDSVEPEVH TQEGGELVLL DEGTGNEEDV LTGETITETE SSFFSDLMDA MLDNAPMTDR 540 LAAMRMDQTV MLDQQCWESK MHLQEMLL

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MNMMKLDDLR EGYRFRPTDS ELVKFLLRFV AKQELHDNGF IAMHDVYKQE PWVTYSHGHS  60
TGGVEDNWDT SIYRYFITPR KKNKGRFRRT VGKRGGTWKQ QDKGRAVTIK SCDQRKRDLI  120
IGRMKSMCYT EKNNTKCINS DDYNDGKWLM KEYVLSDPIL NKFSNSERKD YVMCAIKKLP  180
KRSTSCNFSQ NSNVTTTMES CSEQEKVDTE VTSDMNNYVV DQPLMVQDYF VDQAIVESVE  240
PLMVETVGIN SVKNQEYNEV ITPIYYVEEP MEESKVQSQE ATGVENGSSL LGLSTFSQIQ  300
EFMTADFENA MQEFNVPEIK DRLAENMGCD TLLEKNQTQD QEEEGCTFAV NEEHNITYVE  360
SEAKATSFLE LLTGCRGYAM GNNLVQLVPD QSTTITTTML PQFRAGSWNR LYEPLLSKSL  420
VPESTTMLNS NEIATGECDT TPCSIQPATD VTLDFEGPTT TVEVPEVYLE SELNTILQLE  480
GPDSVEPEVH TQEGGELVLL DEGTGNEEDV LTGETITETE SSFFSDLMDA MLDNAPMTDR  540
LAAMRMDQTV MLDQQCWESK MHLQEMLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-12	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT00848