PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT00591 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 407aa MW: 46399.5 Da PI: 7.4761 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 432.3 | 3.8e-132 | 33 | 407 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfshltaNq 100 ++lL++cAe +s +d+++a++lL+ ls+++sp gd+++Rl++ ft+AL+ rl+r s+ + l+ps+ e++ + +++ +++v+P+++fs+ltaNq OIT00591 33 RQLLISCAELISRSDFSAANRLLSILSTNSSPFGDSTERLVHQFTRALSLRLNRYISSPTNFLTPSNVVETSndLALLQSSYLSLNQVTPFIRFSQLTANQ 133 89****************************************************888888888666654433225555556666***************** PP GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl..vakrledleleeL...r 195 aIlea++ + +++Hi+Dfdi++G+QWp+L+qaLa+R +pp+lRiTg g+ + ++l++tg+rLakfA++lg++f+f++l + ++ +d +++ + OIT00591 134 AILEAINDNqQAIHIVDFDINHGVQWPPLMQALADR-YPPPTLRITGTGN----DLDTLRRTGDRLAKFAHSLGLRFQFHPLliTNNNDHDHDPSIIssiV 229 ******998799***********************9.999**********....***************************96434455566655441116 PP GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296 + p+E+la+n+v+ lhrll+++ +l+ +L+ +ks++Pkvv+++e+ea+hn++ Fl+rf+eal+yy+a+fdslea+lp+ s+er++vE++++grei + OIT00591 230 LLPDETLAINCVFYLHRLLKDREKLRI----FLHRIKSMNPKVVTLAEREANHNHPLFLQRFVEALDYYAAVFDSLEATLPPSSRERMTVEQVWFGREIID 326 677****************99999999....********************************************************************** PP GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve..eesgslvlgWkdrpLvsvSaWr 374 +va+eg++rrerhe++++W+ +l+++GF++v+ls +a +qaklllr ++ s+gy++ + s+s++lgW+++pL+s+S+Wr OIT00591 327 IVAAEGDKRRERHERFRSWEVMLRSCGFSNVALSPFALSQAKLLLRLHYpSEGYQLSvsSTSNSFFLGWQNQPLFSISSWR 407 ******************************************************98855779******************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 407 aa Download sequence |
MLGSFGSSSQ SHDEETDDQR RRFSSTSPAI QIRQLLISCA ELISRSDFSA ANRLLSILST 60 NSSPFGDSTE RLVHQFTRAL SLRLNRYISS PTNFLTPSNV VETSNDLALL QSSYLSLNQV 120 TPFIRFSQLT ANQAILEAIN DNQQAIHIVD FDINHGVQWP PLMQALADRY PPPTLRITGT 180 GNDLDTLRRT GDRLAKFAHS LGLRFQFHPL LITNNNDHDH DPSIISSIVL LPDETLAINC 240 VFYLHRLLKD REKLRIFLHR IKSMNPKVVT LAEREANHNH PLFLQRFVEA LDYYAAVFDS 300 LEATLPPSSR ERMTVEQVWF GREIIDIVAA EGDKRRERHE RFRSWEVMLR SCGFSNVALS 360 PFALSQAKLL LRLHYPSEGY QLSVSSTSNS FFLGWQNQPL FSISSWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G55580.1 | 1e-132 | GRAS family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT00591 |