PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT00591
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GRAS
Protein Properties Length: 407aa    MW: 46399.5 Da    PI: 7.4761
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT00591genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS432.33.8e-132334072374
      GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfshltaNq 100
               ++lL++cAe +s +d+++a++lL+ ls+++sp gd+++Rl++ ft+AL+ rl+r  s+  + l+ps+  e++   +   +++  +++v+P+++fs+ltaNq
  OIT00591  33 RQLLISCAELISRSDFSAANRLLSILSTNSSPFGDSTERLVHQFTRALSLRLNRYISSPTNFLTPSNVVETSndLALLQSSYLSLNQVTPFIRFSQLTANQ 133
               89****************************************************888888888666654433225555556666***************** PP

      GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl..vakrledleleeL...r 195
               aIlea++ + +++Hi+Dfdi++G+QWp+L+qaLa+R  +pp+lRiTg g+    + ++l++tg+rLakfA++lg++f+f++l  + ++ +d +++ +    
  OIT00591 134 AILEAINDNqQAIHIVDFDINHGVQWPPLMQALADR-YPPPTLRITGTGN----DLDTLRRTGDRLAKFAHSLGLRFQFHPLliTNNNDHDHDPSIIssiV 229
               ******998799***********************9.999**********....***************************96434455566655441116 PP

      GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
               + p+E+la+n+v+ lhrll+++ +l+     +L+ +ks++Pkvv+++e+ea+hn++ Fl+rf+eal+yy+a+fdslea+lp+ s+er++vE++++grei +
  OIT00591 230 LLPDETLAINCVFYLHRLLKDREKLRI----FLHRIKSMNPKVVTLAEREANHNHPLFLQRFVEALDYYAAVFDSLEATLPPSSRERMTVEQVWFGREIID 326
               677****************99999999....********************************************************************** PP

      GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve..eesgslvlgWkdrpLvsvSaWr 374
               +va+eg++rrerhe++++W+ +l+++GF++v+ls +a +qaklllr ++ s+gy++   + s+s++lgW+++pL+s+S+Wr
  OIT00591 327 IVAAEGDKRRERHERFRSWEVMLRSCGFSNVALSPFALSQAKLLLRLHYpSEGYQLSvsSTSNSFFLGWQNQPLFSISSWR 407
               ******************************************************98855779******************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
MLGSFGSSSQ SHDEETDDQR RRFSSTSPAI QIRQLLISCA ELISRSDFSA ANRLLSILST  60
NSSPFGDSTE RLVHQFTRAL SLRLNRYISS PTNFLTPSNV VETSNDLALL QSSYLSLNQV  120
TPFIRFSQLT ANQAILEAIN DNQQAIHIVD FDINHGVQWP PLMQALADRY PPPTLRITGT  180
GNDLDTLRRT GDRLAKFAHS LGLRFQFHPL LITNNNDHDH DPSIISSIVL LPDETLAINC  240
VFYLHRLLKD REKLRIFLHR IKSMNPKVVT LAEREANHNH PLFLQRFVEA LDYYAAVFDS  300
LEATLPPSSR ERMTVEQVWF GREIIDIVAA EGDKRRERHE RFRSWEVMLR SCGFSNVALS  360
PFALSQAKLL LRLHYPSEGY QLSVSSTSNS FFLGWQNQPL FSISSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-132GRAS family protein