PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT00555
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 307aa    MW: 33620.9 Da    PI: 6.848
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT00555genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-1392139455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +h   Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk Lq
  OIT00555  92 MHIWTERERRKKMRNMFSNLHALLPQL----PPKADKSTIVDEAVNYIKTLQ 139
               56678*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MDEGGEDCFI WENQGWGFLN SDNSGGNEAK SSGTKLPDTS QLPVSDGVAR EIEMAGPSNG  60
RKRSAPGKNG VKGNREVNEG KVNGAGESDH EMHIWTERER RKKMRNMFSN LHALLPQLPP  120
KADKSTIVDE AVNYIKTLQH TLQKLQRQKL ERLHGMATSM NPSIITSQKL SADSIISREA  180
FLADQGSTNN AAISPTNNAA NPISMPHFPA VFQSWTSPNV ILNVCGEEAH ISVCCPKKPG  240
LLSSICYVLE KHKIEVVSAQ ISSNDHRNMY MIQAHASGAS DKFSETFPVE EIYKQAAGEI  300
IMCVTSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.16e-53bHLH family protein