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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT00365 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | NAC | ||||||||
| Protein Properties | Length: 334aa MW: 37662.2 Da PI: 8.2003 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 180 | 5.9e-56 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
lppGfrFhPtdeel+++yL kkv + ++++ ++i+evd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ + +lv
OIT00365 14 LPPGFRFHPTDEELITYYLLKKVLDGNFTA-RAIAEVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSkTCALV 113
79*************************999.89***************99999****************************************9745567* PP
NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
g+kktLvfy+grapkgek++Wvmheyrl
OIT00365 114 GMKKTLVFYRGRAPKGEKSNWVMHEYRL 141
**************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 334 aa Download sequence |
MENYQHFDCS DGNLPPGFRF HPTDEELITY YLLKKVLDGN FTARAIAEVD LNKCEPWELP 60 GKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKTC ALVGMKKTLV 120 FYRGRAPKGE KSNWVMHEYR LDGKFAYHYI SRSSKDEWVI SRVFQKNGSS VGANSNGGKK 180 RLSSSINMYQ EVSSPSSVSQ LPPLLDSSSY STTATSAVIN ADRESFKKEH VPCFSTTATH 240 SFDPSSVFDI SSNSLHALPP PSFSAILDSS TNFTHYTRNS TFPSLRSLHE NLQLPLFSSG 300 APAMHGSFPA PIDNWPVPET QKVEQSELDC MWSY |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G53950.1 | 1e-105 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT00365 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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