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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT00346 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | BES1 | ||||||||
| Protein Properties | Length: 316aa MW: 33849.9 Da PI: 8.853 | ||||||||
| Description | BES1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF822 | 206.2 | 9.1e-64 | 2 | 144 | 1 | 149 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101
++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e+ + +g s+s+sp+ss+q
OIT00346 2 TSGTRIPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYQLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPMERLDFIGGSTSMSPCSSYQ------ 96
5899*******************************************************************************************...... PP
DUF822 102 alaspvesysaspksssfpspsslds..islasaasllpvlsvlslvsss 149
+sp +s ++sp+sss sp+s++ + +++ +sl+p+l++ls+ sss
OIT00346 97 --PSPFTSNNPSPASSSLHSPASSSYaaNLNMDGKSLIPWLKNLSSGSSS 144
..77888888888777766665544400344445899******9996665 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 316 aa Download sequence |
MTSGTRIPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY QLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKGCKPMERL DFIGGSTSMS PCSSYQPSPF TSNNPSPASS SLHSPASSSY 120 AANLNMDGKS LIPWLKNLSS GSSSASSSKL PHFHILTGSI SAPVTPPFSS PTARTPRLKT 180 DAGWAGFRYP FLPSSTPASP VRQTFTGSEW LTGISGPPSP TYSLVSSNPF GFKMDGLALS 240 HGGSRMCTPG QSGTCSPAIT AGLDNTADIP MAEVISDEFA FGSNAGGMVK PWEGERIHED 300 CGPDDLELTL GSSKTR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G78700.1 | 1e-109 | BES1 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT00346 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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