PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT00110
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family SAP
Protein Properties Length: 411aa    MW: 46168.3 Da    PI: 6.607
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT00110genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP613.74.1e-1873541176455
       SAP  76 vfqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfd 176
               vf vcstwravsrsdllwq+lt  iW+r +llr+tW++ey+y+h+t++nfr+r+y y tlqf p+++++  ++d lsCr+l+lsd++laaGf+dG+v+lf+
  OIT00110  35 VFVVCSTWRAVSRSDLLWQNLTLEIWNRRHLLRQTWHDEYVYWHQTSNNFRQRTYIYHTLQFVPTNNND--NNDGLSCRRLTLSDHHLAAGFSDGSVQLFH 133
               9***************************************************************95555..458*************************** PP

       SAP 177 letrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaete 277
               l+tr+h+stf+pq rdrlGr+sravsGi++sd +lvfa+ldGdihvavi g  a+++rra+lGdvvndGalvdf+G+++WwvGlyaGvpGrafhiW++ete
  OIT00110 134 LQTRVHLSTFHPQLRDRLGRYSRAVSGIILSDENLVFASLDGDIHVAVISG--ATPPRRAHLGDVVNDGALVDFTGCDHWWVGLYAGVPGRAFHIWNSETE 232
               *************************************************99..78********************************************** PP

       SAP 278 elvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevc 378
               el++vGG ltdPeavmGWh+lteltelv r+r++ ++tavaCt lrlvv++lrnqg++++e+++++ liv+s+da+ne +v+vd +Gvatv rve+lee c
  OIT00110 233 ELIYVGGDLTDPEAVMGWHLLTELTELVARIRIATQDTAVACTGLRLVVINLRNQGLIIQERSFQQVLIVGSFDATNELLVAVDGQGVATVLRVEDLEEAC 333
               ***************************************************************************************************** PP

       SAP 379 rfrvrg.aqrgvlgCvng.gyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455
               rf+vrg +qrgv+gC+n  gya++y ggv+rvW +++ + ylyslrer+gevna +a++rh+ ++ssdgtihl+dfgaq
  OIT00110 334 RFNVRGaSQRGVVGCMNSsGYAVMYVGGVIRVWAVQNGV-YLYSLRERIGEVNATLANQRHIVACSSDGTIHLWDFGAQ 411
               ******9**********549****************988.*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MVCYRWQLAT TTTTMTLSVF GKPQLWDILI SNNGVFVVCS TWRAVSRSDL LWQNLTLEIW  60
NRRHLLRQTW HDEYVYWHQT SNNFRQRTYI YHTLQFVPTN NNDNNDGLSC RRLTLSDHHL  120
AAGFSDGSVQ LFHLQTRVHL STFHPQLRDR LGRYSRAVSG IILSDENLVF ASLDGDIHVA  180
VISGATPPRR AHLGDVVNDG ALVDFTGCDH WWVGLYAGVP GRAFHIWNSE TEELIYVGGD  240
LTDPEAVMGW HLLTELTELV ARIRIATQDT AVACTGLRLV VINLRNQGLI IQERSFQQVL  300
IVGSFDATNE LLVAVDGQGV ATVLRVEDLE EACRFNVRGA SQRGVVGCMN SSGYAVMYVG  360
GVIRVWAVQN GVYLYSLRER IGEVNATLAN QRHIVACSSD GTIHLWDFGA Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-156SAP family protein