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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT00081 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | ERF | ||||||||
| Protein Properties | Length: 201aa MW: 22295.9 Da PI: 7.9375 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 63.9 | 3.3e-20 | 25 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr ++ +gr++AeIrdp + +r++lg+f+tae+Aa+a++ a+++l+g
OIT00081 25 PRYRGVRKRP-WGRFAAEIRDPI----KkTRVWLGTFDTAEDAARAYDDAARALRG 75
68********.**********72....35*************************99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 201 aa Download sequence |
MRHRKLSEVN RPGSDLLKQP ETDPPRYRGV RKRPWGRFAA EIRDPIKKTR VWLGTFDTAE 60 DAARAYDDAA RALRGPKAKT NFPNLAAITT QQDNNPYGSN QFELFPNSRP ASSSMSSTLE 120 SSSGPRGSGN KLTRMKIPRP VLPPEDCRSD CDSSSSVVDD RCDIDQTSSF LPKQPLPFDL 180 NLPPPSDDVD ADDLHVTALC L |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G20310.1 | 1e-23 | ERF family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT00081 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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