PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT00033 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 348aa MW: 39540.4 Da PI: 7.2046 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.8 | 4.5e-14 | 253 | 300 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er+RR+++N++f eLr+++P+ ++++Ka+ L Av YI++L OIT00033 253 QMNHVEAERQRREKLNHRFYELRSVVPQV-----TRMDKASLLSDAVAYINEL 300 689*************************8.....7***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MDELIFPSAS ISQENQPSTL EQRLQYILKS QTNSWAYAIF WQTTSNKDNN GSFFLTWGDG 60 HFQGSNKDVE WFYVLSLAKS YSGNEGVIGK AFSTASFVWL NGAQQLQFCS CERAKEAQYN 120 GVKTLVCVPI SNGVLELGSS DIIKEDWTLV QQVKSLFCSV QENGPINFLD QNSTIYFANF 180 DFVTGMQIDV QESDNNSSKK VATMSHASFL DSELSNSDCQ LLEHPLQKSR VGSKIRRTYR 240 KRERKPGVDC DKQMNHVEAE RQRREKLNHR FYELRSVVPQ VTRMDKASLL SDAVAYINEL 300 KAKVDKLESK LHRVLELKKK PQMEHNDAVD NQSSTNSVDH VSPSPILK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17880.1 | 1e-58 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT00033 |