PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIS99920

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

GeBP

Protein Properties

Length: 424aa MW: 46335.5 Da PI: 4.7091

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS99920	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	117.5	7.4e-37	98	198	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 klfqrlw++eDei lLqG++++++++g s ++d++afy+++k++++++++k+qlveK+rrLKkK+++ ++k++sgk+++f+++hdq +fe+s+kiW OIS99920 98 KLFQRLWTDEDEIELLQGFLEYTTQRGGinssSHHHDTTAFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVMSKMASGKDFVFKSSHDQATFEISRKIWS 198 579*********************9877644555**************************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MASVEDQHNN QVYNDDDLDD DVVDEEDDDV DVDDDDDEDS TSSPPAPTPA PVDQRTVTIA 60 VVGVPAQRIN EFAAVTPPPT AATIVEEKKP SAIDDSRKLF QRLWTDEDEI ELLQGFLEYT 120 TQRGGINSSS HHHDTTAFYD QIKSKLQLDF NKNQLVEKLR RLKKKYRNVM SKMASGKDFV 180 FKSSHDQATF EISRKIWSNA VPVVVRGGGS AAPPPPPPED GGFDDEDSHL NLNANVVDHS 240 HNGIDIKTPR SRKRSRGGAV KVEEKHGFIQ HYYLPSPSGG GTNMSSHAPA PAPAPVPAPG 300 FTPFPMTAPQ ATAPPTTTAA VAASAAASIP SLIEETVRSC LSPIFKELLN NVTNLSGSRS 360 FGFGMALSPI PLGFGSSGAM NSDMMADEKW RKQQMLELEV YSRRLELVQD QIKAQLEELR 420 SMNT

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MASVEDQHNN QVYNDDDLDD DVVDEEDDDV DVDDDDDEDS TSSPPAPTPA PVDQRTVTIA  60
VVGVPAQRIN EFAAVTPPPT AATIVEEKKP SAIDDSRKLF QRLWTDEDEI ELLQGFLEYT  120
TQRGGINSSS HHHDTTAFYD QIKSKLQLDF NKNQLVEKLR RLKKKYRNVM SKMASGKDFV  180
FKSSHDQATF EISRKIWSNA VPVVVRGGGS AAPPPPPPED GGFDDEDSHL NLNANVVDHS  240
HNGIDIKTPR SRKRSRGGAV KVEEKHGFIQ HYYLPSPSGG GTNMSSHAPA PAPAPVPAPG  300
FTPFPMTAPQ ATAPPTTTAA VAASAAASIP SLIEETVRSC LSPIFKELLN NVTNLSGSRS  360
FGFGMALSPI PLGFGSSGAM NSDMMADEKW RKQQMLELEV YSRRLELVQD QIKAQLEELR  420
SMNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-53	GeBP family protein

Link Out ? help Back to Top
Ensembl	OIS99920