PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99899
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 314aa    MW: 35371.5 Da    PI: 9.4923
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99899genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA603.1e-19179212134
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
               C+ C+ttkTplWR+gp g+ktLCnaCG+++rk +
  OIS99899 179 CADCNTTKTPLWRSGPKGPKTLCNACGIRQRKAR 212
               *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MTPTDHITNS SSPFPFVLNN EDYDLNHSLV SPNYYQTSSS SSYSSPYQFF FNTTTDQNQS  60
GYYYPDEYYT PPHQPEVDNE GGSYDVEKKN KVGSGLKLTL WKREDKYHEN QNEKNPVKWM  120
SSKIKASGQT SMKNTTNNTY IKLKLEDQKK QQPSYPLEST DYSSNSSNNS NNNIPIRVCA  180
DCNTTKTPLW RSGPKGPKTL CNACGIRQRK ARRAMAAAAN GETLTTETSS SSMKKKVKHL  240
HKEKITKVNV TLPYKKRCKF GPSSSSNTAP KKLCNFEDFL INLTNNLALH QIFPQDEKEA  300
AILLMALSSG LVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.12e-17GATA family protein