PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS99712 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | SBP | ||||||||
Protein Properties | Length: 184aa MW: 20927.2 Da PI: 10.1754 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.6 | 6.5e-42 | 50 | 126 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+e+C+adls+a++yhrrhkvCe h+ka+vv+v+gl+qrfCqqCsrfhel+efDe+krsCrrrLa+hnerrrk++ OIS99712 50 CCQAEKCSADLSDARQYHRRHKVCEYHAKAQVVVVAGLRQRFCQQCSRFHELTEFDESKRSCRRRLAGHNERRRKSS 126 6**************************************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
METAGHHNIS TSEDDYKKKR GSCNNNITTN NNHIKKGSIN NGGSSTTQRC CQAEKCSADL 60 SDARQYHRRH KVCEYHAKAQ VVVVAGLRQR FCQQCSRFHE LTEFDESKRS CRRRLAGHNE 120 RRRKSSLPSA ADQSQIAETG SSRKGTVQLN NKDINNMMCG QVNDRGRIQI SIQENSTFKN 180 FHLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 2e-46 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS99712 |